Getting Started
Generating JSON File Can be generated from Excel spreadsheet template, or for simple cases, directly from multifasta file. The Excel template is located...
Tue, Feb 7, 2017 at 4:32 PM
Usage The nasp program is the pipeline. While you can run the other programs listed in this section directly, they are primarily internal functions of the ...
Tue, Feb 7, 2017 at 4:12 PM
The Large Scale Blast Score Ratio (LS-BSR) pipeline Updated 12/13/2016 Citation: Jason W. Sahl, J. Gregory Caporaso, David A. Rasko, Paul S. Keim (...
Mon, Feb 27, 2017 at 12:38 PM
#Instructions for using UGAP
-Dependencies that MUST be installed by the user:
1. SPAdes, must be > version 3.5. Working on v3.7.1.
2. genomeCove...
Fri, Mar 3, 2017 at 11:42 AM